The detailed information of tRNA gene sequence


Sequence ID>WENV180084530
Genome IDMPMD02206322
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1009
End posion on genome 922
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattgaatat
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGAAGGTGCTCGCCTGCTAAGCGAATGTGGGGTTACCCACC
GAGAGTTCGAATCTCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aggtttcttt
Secondary structure (Cloverleaf model)
>WENV180084530	Ser	GCT
                   t      GCCA aggtttcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G A G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGGGGTTACCCACC
                    C   A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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