The detailed information of tRNA gene sequence


Sequence ID>WENV180084544
Genome IDMPMD02207886
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1136
End posion on genome 1223
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccattaatca
tRNA gene sequence 
GGGTAGGTGTCTGAGTGGTTGAAGGTGCCAGTCTTGAAAACTGGTGGGTATTTATAGTAT
CCCCAAGGTTCGAATCCTTGTCTACCCGgct
Downstream region at tRNA end position 
tggataacca
Secondary structure (Cloverleaf model)
>WENV180084544	Ser	TGA
                   a      Ggct tggataacca
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G + T          T A
                    T     G T T C C     A
      T G A        G      | | | | |     G
    G       G T C T       C A A G G     C
    G         + |                   T T
    T       A G G T
      T G A        G     TGGGTATTTATAGTATCCC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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