The detailed information of tRNA gene sequence


Sequence ID>WENV180084554
Genome IDMPMD02209128
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 148
End posion on genome 235
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccaaatacat
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTGAATCGGGCGGTCTCGAAAACCGTTGAACCGTAAGGTTCC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttcccgtgcc
Secondary structure (Cloverleaf model)
>WENV180084554	Ser	CGA
                   t      GCCA ttcccgtgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGAACCGTAAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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