The detailed information of tRNA gene sequence


Sequence ID>WENV180084567
Genome IDMPMD02211129
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 476
End posion on genome 404
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggtccataac
tRNA gene sequence 
GCACCAGTGGTCTAGTGGCTACGACGTCAGCCTCACACGCTGAAGGTCGCCAGTTCGATC
CTGGCCTGGTGTAttg
Downstream region at tRNA end position 
ttgagaaaga
Secondary structure (Cloverleaf model)
>WENV180084567	Val	CAC
                   c      Attg ttgagaaaga
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     G - C          C T
                    T     C G G T C     A
      T G A        G      | | | | |     G
    G       T C T G       G C C A G     C
    G         | | |                 T T
    C       C G A C
      T A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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