The detailed information of tRNA gene sequence


Sequence ID>WENV180084592
Genome IDMPMD02213244
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1316
End posion on genome 1229
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaaaatatt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGAATGGGGCTCCCTGCTAAGGAGTTGTGCCTTTACGGGTA
CCGGGGGTTCGAATCCCTTCCTCTCCGCtt
Downstream region at tRNA end position 
gttaagttgg
Secondary structure (Cloverleaf model)
>WENV180084592	Ser	GCT
                   t      GCtt gttaagttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + + | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTGCCTTTACGGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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