The detailed information of tRNA gene sequence


Sequence ID>WENV180084601
Genome IDMPMD02214608
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1595
End posion on genome 1670
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
atcctaataa
tRNA gene sequence 
GGGCCCTTAGCTCAGTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCGGGGTTCGAAT
CCCTGAGGGCCCACCA
Downstream region at tRNA end position 
aaaaatgcaa
Secondary structure (Cloverleaf model)
>WENV180084601	Ile2	CAT
                   a      ACCA aaaaatgcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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