The detailed information of tRNA gene sequence


Sequence ID>WENV180084616
Genome IDMPMD02217411
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 361
End posion on genome 447
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacttcaaac
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTAATGCAACAGCCTGCTAAGCTGTCAACGAGCAATCGTTGCC
CGGGTTCGAATCCCGGTCTCTCCGCCA
Downstream region at tRNA end position 
aaacctaata
Secondary structure (Cloverleaf model)
>WENV180084616	Ser	GCT
                   c      GCCA aaacctaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G A C G       C C G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CAACGAGCAATCGTTGC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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