The detailed information of tRNA gene sequence


Sequence ID>WENV180084630
Genome IDMPMD02219254
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 2970
End posion on genome 3046
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taagatcttt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGAGTTCGAA
TCTCTCCACCCCGACCA
Downstream region at tRNA end position 
ttcaccgacc
Secondary structure (Cloverleaf model)
>WENV180084630	Pro	TGG
                   t      ACCA ttcaccgacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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