The detailed information of tRNA gene sequence


Sequence ID>WENV180084659
Genome IDMPMD02223271
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 150
End posion on genome 224
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ctcccaattg
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCCGGGGTTCGAG
TCCCTGTGGGCCCACtt
Downstream region at tRNA end position 
ttagatcgct
Secondary structure (Cloverleaf model)
>WENV180084659	Ile2	CAT
                   g      ACtt ttagatcgct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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