The detailed information of tRNA gene sequence


Sequence ID>WENV180084677
Genome IDMPMD02226308
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 243
End posion on genome 145
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cttcgccgat
tRNA gene sequence 
GGCGAGGTTTCCGCGGCTGGTGCCCGGCCCCGACTTCAAATCGGGTGTGGAGCGTGTCAC
CACGTTCCAGGCGGGTTCGATTCCCGTCCCTCGCCGCCA
Downstream region at tRNA end position 
gagtgtcttt
Secondary structure (Cloverleaf model)
>WENV180084677	SeC	TCA
                   t      GCCA gagtgtcttt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C G G        T      + | | | |     G
    T       C G C C       G C G G G     C
    G         | | |                 T T
    G       C C G G
      T G C        C     TGTGGAGCGTGTCACCACGTTCCAG
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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