The detailed information of tRNA gene sequence


Sequence ID>WENV180084709
Genome IDMPMD02230362
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 182
End posion on genome 109
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atgattaaat
tRNA gene sequence 
GTACAGGTGCTAGAATGGTTAATAGGATGGACTGCAAATCCATATTTCGAGAGTTCGATT
CTCTCTCTGTACTCaa
Downstream region at tRNA end position 
ttttgccctt
Secondary structure (Cloverleaf model)
>WENV180084709	Cys	GCA
                   t      TCaa ttttgccctt
                     G - C
                     T - A
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T T
                    T     C T C T C     A
      T A A        G      | | | | |     G
    G       G A T C       G A G A G     C
    G         | | |                 T T
    T       A T A G
      T A          G     ATTTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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