The detailed information of tRNA gene sequence


Sequence ID>WENV180084757
Genome IDMPMD02236186
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 488
End posion on genome 392
Amino Acid Sup
Anticodon TCA
Upstream region at tRNA start position 
aactacctat
tRNA gene sequence 
AGGGGCGTGGACCCGGCTACGGTTTCCGGGGATGGTCTTCAAAACCATGCGGGGCGTCCA
AAGTCCTGCCCGAGGGTTCGACTCCTTCCGCCCCTGCaa
Downstream region at tRNA end position 
aatacctcat
Secondary structure (Cloverleaf model)
>WENV180084757	Sup	TCA
                   t      GCaa aatacctcat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     C T T C C     A
        G C        G      | | + | |     G
      G     C C A G       G A G G G     C
      C     | | | +                 T T
      T     G G T T
        A C        T     AACCATGCGGGGCGTCCAAAGTCCTGCCC
                    C   A
                    C   A
                    G - C
                    G + T
                    G + T
                  G       C
                  A       T
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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