The detailed information of tRNA gene sequence


Sequence ID>WENV180084782
Genome IDMPMD02239332
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 2831
End posion on genome 2741
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcctgcccc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aattatttcc
Secondary structure (Cloverleaf model)
>WENV180084782	Ser	GGA
                   c      GCCA aattatttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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