The detailed information of tRNA gene sequence


Sequence ID>WENV180084785
Genome IDMPMD02239612
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 101
End posion on genome 27
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccccctcaa
tRNA gene sequence 
GGGCACGTAGCTCAGTGGGAGAGCGCATGCTTCACACGCATGAGGTCACAAGTTCAATCC
TTGTCGTGTCCACCA
Downstream region at tRNA end position 
attcgatcaa
Secondary structure (Cloverleaf model)
>WENV180084785	Val	CAC
                   a      ACCA attcgatcaa
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G T T C     A
        G A        A      | | | | |     A
      T     C T C G       A C A A G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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