The detailed information of tRNA gene sequence


Sequence ID>WENV180084816
Genome IDMPMD02244630
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1636
End posion on genome 1545
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatccctcT
tRNA gene sequence 
GGACAGGTGGCCGAGCGGCTGAAGGCACCGGTTTGCTAAACCGGCGTACTGGTTATACCG
GTACCGCGGGTTCGAATCCCGCCCTGTCCGTtt
Downstream region at tRNA end position 
aaaaccatat
Secondary structure (Cloverleaf model)
>WENV180084816	Ser	GCT
                   T      GTtt aaaaccatat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACTGGTTATACCGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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