The detailed information of tRNA gene sequence


Sequence ID>WENV180084933
Genome IDMPMD02260018
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 323
End posion on genome 235
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgatttatt
tRNA gene sequence 
GGAGAGATGGCAGAGTCTGGCTGAATGCGCCGCACTCGAAATGCGGTATATCTTTTGGGT
ATCGGGGGTTCGAATCCCTCTCTCTCCGCga
Downstream region at tRNA end position 
aatacaaata
Secondary structure (Cloverleaf model)
>WENV180084933	Ser	CGA
                   t      GCga aatacaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATATCTTTTGGGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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