The detailed information of tRNA gene sequence


Sequence ID>WENV180084964
Genome IDMPMD02264289
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 325
End posion on genome 419
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccataagttt
tRNA gene sequence 
GGAAGCGAATGTGACCCTGGTGGGCACCACAGCCTTCAAAGCTGATGTGTGGCAGTGATG
TCATAGGTGAGTTCGATTCTCACACGTTTCCGCCA
Downstream region at tRNA end position 
attaagagga
Secondary structure (Cloverleaf model)
>WENV180084964	SeC	TCA
                   t      GCCA attaagagga
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     A   A          T T
                    A     C A C T C     A
      C C C        T      | | | | |     G
    T       A G T G       G T G A G     C
    G         | | |                 T T
    G       G C A C
      T G G        C     TGTGTGGCAGTGATGTCATAG
                    A   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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