The detailed information of tRNA gene sequence


Sequence ID>WENV180084997
Genome IDMPMD02269651
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1545
End posion on genome 1468
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gctcacaagc
tRNA gene sequence 
GGGGATGTAGCTCAATTGGTTTAGAGTGCCGGCCTGTCACGCCGGAGGTTGCGGGTTCAA
GTCCCGTCATCCTCGCCA
Downstream region at tRNA end position 
ttccgcttga
Secondary structure (Cloverleaf model)
>WENV180084997	Asp	GTC
                   c      GCCA ttccgcttga
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T T A A        A      + | | | |     A
  G         C T C G       G C G G G     C
  G         | | | +                 T T
  T         G A G T
    T T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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