The detailed information of tRNA gene sequence


Sequence ID>WENV180085004
Genome IDMPMD02271299
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 4235
End posion on genome 4322
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcctcccgt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGGCGGTCTTGAAAACCGCTGTGGGGAAACTCACC
GTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
aaaaacgtcg
Secondary structure (Cloverleaf model)
>WENV180085004	Ser	TGA
                   t      GCCA aaaaacgtcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTGGGGAAACTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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