The detailed information of tRNA gene sequence


Sequence ID>WENV180085005
Genome IDMPMD02271299
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 4402
End posion on genome 4489
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgccctcct
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGCAACTCATC
GAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgtgcactgg
Secondary structure (Cloverleaf model)
>WENV180085005	Ser	GCT
                   t      GCCA tgtgcactgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGCAACTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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