The detailed information of tRNA gene sequence


Sequence ID>WENV180085034
Genome IDMPMD02272733
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 2442
End posion on genome 2533
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctcgaccgt
tRNA gene sequence 
GGAGAGGTGGTAGAGTGGCCGAATGCGGCAGCTTGCTAAGCTGTTGAGTCGGACAACCGG
CTCCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tattctacag
Secondary structure (Cloverleaf model)
>WENV180085034	Ser	GCT
                   t      GCCA tattctacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G A T G       C A G G G     C
    G         | + |                 T T
    C       A T G C
      C G A        G     TGAGTCGGACAACCGGCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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