The detailed information of tRNA gene sequence


Sequence ID>WENV180085046
Genome IDMPMD02274092
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 5667
End posion on genome 5580
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaccgattg
tRNA gene sequence 
GGATGGGTGGCCGAGTGGACTAAGGCGGCAGTCTTGAAAACTGCTGTACGGGTGACCGTA
CCGGGGGTTCGAATCCCTCCCCATCCGCtt
Downstream region at tRNA end position 
gttgttccta
Secondary structure (Cloverleaf model)
>WENV180085046	Ser	TGA
                   g      GCtt gttgttccta
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    A       A G G C
      C T A        G     TGTACGGGTGACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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