The detailed information of tRNA gene sequence


Sequence ID>WENV180085070
Genome IDMPMD02277390
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 230
End posion on genome 319
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgcctgccc
tRNA gene sequence 
GGAGAGGTGACGGAGCGGTTGATCGTGCGCGCTTGGAAAGCGCGTGACTCCGTAAGGGGT
CCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
acaccccgac
Secondary structure (Cloverleaf model)
>WENV180085070	Ser	GGA
                   c      GCCA acaccccgac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G G C A       G G G G G     C
    G       + | | |                 T T
    T       T C G T
      T G A        G     TGACTCCGTAAGGGGTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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