The detailed information of tRNA gene sequence


Sequence ID>WENV180085091
Genome IDMPMD02280187
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 336
End posion on genome 412
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cgacctatga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCAGTTCAAA
TCTGGCCCCCGCTACCA
Downstream region at tRNA end position 
aagtgattac
Secondary structure (Cloverleaf model)
>WENV180085091	fMet	CAT
                   a      ACCA aagtgattac
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G T C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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