The detailed information of tRNA gene sequence


Sequence ID>WENV180085093
Genome IDMPMD02280252
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 24552
End posion on genome 24643
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcaggttct
tRNA gene sequence 
GGAGACGTGACCGAGTGGCTGAAGGTGCATGATTGCTAATCATGTGAGTGGGGAAACTTG
CTCCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tcccgtctcg
Secondary structure (Cloverleaf model)
>WENV180085093	Ser	GCT
                   t      GCCA tcccgtctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        G     TGAGTGGGGAAACTTGCTCC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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