The detailed information of tRNA gene sequence


Sequence ID>WENV180085102
Genome IDMPMD02281942
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 195
End posion on genome 107
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagtaaaaca
tRNA gene sequence 
GGAGAGCTGGCCGAGCGGTCTAAGGCGCACGCTTGGAAGGCGTGTATGGGTTATTCCTAT
CAAGGGTTCGAATCCCTTGCTCTCCGCCA
Downstream region at tRNA end position 
tatagcaaaa
Secondary structure (Cloverleaf model)
>WENV180085102	Ser	GGA
                   a      GCCA tatagcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TATGGGTTATTCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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