The detailed information of tRNA gene sequence


Sequence ID>WENV180085123
Genome IDMPMD02284547
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 201
End posion on genome 125
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagagatata
tRNA gene sequence 
GGAGCGGTAGTTCAGCTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAA
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
aaagaatata
Secondary structure (Cloverleaf model)
>WENV180085123	Asp	GTC
                   a      GCCA aaagaatata
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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