The detailed information of tRNA gene sequence


Sequence ID>WENV180085142
Genome IDMPMD02287659
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 454
End posion on genome 382
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aatatactat
tRNA gene sequence 
GGCCCCCTCGTCTAGTGGTTAGGACCTCAGGTTTTCATCCTGGAAACAGCAGTTCGATTC
TGCTGGGGGCTACaa
Downstream region at tRNA end position 
atttgaaagg
Secondary structure (Cloverleaf model)
>WENV180085142	Glu	TTC
                   t      ACaa atttgaaagg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G          T T
                    T     T C G T C     A
      T G A        C      | | | | |     G
    G       T C T G       A G C A G     C
    G       + | | |                 T T
    T       G G A C
      T A          C     AAAC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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