The detailed information of tRNA gene sequence


Sequence ID>WENV180085149
Genome IDMPMD02288465
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1269
End posion on genome 1192
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccgctcccgg
tRNA gene sequence 
AGGGCAGTAGCTCCAATTGGTTAGAGCGACTGATTCCAAATCAGTAGGATCGGGGTTCGA
GTCCCTGCTGCCCTGCCA
Downstream region at tRNA end position 
aaaagatcat
Secondary structure (Cloverleaf model)
>WENV180085149	Trp	CCA
                   g      GCCA aaaagatcat
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     G T C C C     A
    T A A C        A      | + | | |     G
  T         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGAT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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