The detailed information of tRNA gene sequence


Sequence ID>WENV180085158
Genome IDMPMD02288909
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 460
End posion on genome 371
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttattacttt
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGCTTAAGGTGCATGCTTGGAAAGCATGTGTAGGCGCAAGCCTA
CCGGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tttcatgttt
Secondary structure (Cloverleaf model)
>WENV180085158	Ser	GGA
                   t      GCCA tttcatgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G T C T       G G G A G     C
    G         + |                   T T
    C       A G G T
      T T A        G     TGTAGGCGCAAGCCTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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