The detailed information of tRNA gene sequence


Sequence ID>WENV180085165
Genome IDMPMD02289772
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 226
End posion on genome 133
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaataatttt
tRNA gene sequence 
GGGAATGATTAGGAGGCTGGTGCCCCTCGTGGTCTTCAAAACCATTGGGATCTACACAAT
AGATCCGGTGAGTTCGATTCTCACGCGTTCCCGCtc
Downstream region at tRNA end position 
gtcgtgctca
Secondary structure (Cloverleaf model)
>WENV180085165	SeC	TCA
                   t      GCtc gtcgtgctca
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     C A C T C     A
      C G G        T      | | | | |     G
    T       A G G A       G T G A G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGGGATCTACACAATAGATCCG
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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