The detailed information of tRNA gene sequence


Sequence ID>WENV180085169
Genome IDMPMD02290188
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 159
End posion on genome 85
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
attttggttt
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCAGTAGACTCATAATCTATTGGTCCGGGGTTCGAG
TCCCTGAGGGCCCACat
Downstream region at tRNA end position 
caaaaccctt
Secondary structure (Cloverleaf model)
>WENV180085169	Ile2	CAT
                   t      ACat caaaaccctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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