The detailed information of tRNA gene sequence


Sequence ID>WENV180085177
Genome IDMPMD02291678
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 452
End posion on genome 371
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaccagcaga
tRNA gene sequence 
GACACTTTGGCCGAGCGGTTAAGGCGTCGGCCTGCTAAGCCGATGGGGTCTCCCCGCGTG
GGTTCGAATCCCACAGGTGTCGttc
Downstream region at tRNA end position 
ttgttctttc
Secondary structure (Cloverleaf model)
>WENV180085177	Ser	GCT
                   a      Gttc ttgttctttc
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGGTCTCCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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