The detailed information of tRNA gene sequence


Sequence ID>WENV180085193
Genome IDMPMD02292992
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1560
End posion on genome 1471
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaaacgccat
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGAATGGGCCCGCTTCGAAAGCGGGTGACTCTGAAAGGGGT
CCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tccctggaaa
Secondary structure (Cloverleaf model)
>WENV180085193	Ser	CGA
                   t      GCCA tccctggaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGACTCTGAAAGGGGTCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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