The detailed information of tRNA gene sequence


Sequence ID>WENV180085222
Genome IDMPMD02297784
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 277
End posion on genome 195
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tggttttaaa
tRNA gene sequence 
AATAAGATGGCTGAGTGGTTTAAGGCGGTTATTTGCTAAATAATTTATTTTTTAATACAT
AGGTTCAAATCCTATTCTTATTAaag
Downstream region at tRNA end position 
aagatagtat
Secondary structure (Cloverleaf model)
>WENV180085222	Ser	GCT
                   a      Aaag aagatagtat
                     A - T
                     A - T
                     T - A
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    G       G T C G       A T A G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TTATTTTTTAATAC
                    G + T
                    T - A
                    T - A
                    A - T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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