The detailed information of tRNA gene sequence


Sequence ID>WENV180085226
Genome IDMPMD02298410
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 154
End posion on genome 248
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aagccgcggc
tRNA gene sequence 
GGAGGCGCTCGCTCGCCGGTGCGGGTCTGGGACTTCAAATCCTATGTAGGGCGGTGCTCC
CGTCCTGGGCGGGTTCGACTCCCGTGCGCCTCCGAtt
Downstream region at tRNA end position 
cagctaagag
Secondary structure (Cloverleaf model)
>WENV180085226	SeC	TCA
                   c      GAtt cagctaagag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G          T C
                    T     T G C C C     A
      C C G        C      + | | | |     G
    G       C T C G       G C G G G     C
    G       | + | +                 T T
    T       G G G T
      G C          C     TGTAGGGCGGTGCTCCCGTCCTGG
                    T - A
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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