The detailed information of tRNA gene sequence


Sequence ID>WENV180085234
Genome IDMPMD02298969
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 640
End posion on genome 566
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gagaataatt
tRNA gene sequence 
GGGGGATTGGTATAGTTGGGAACACGTGGCCCTTGCACGGCCGAGTCAGCGGTTCAAGTC
CGCTATCCTCCACCA
Downstream region at tRNA end position 
agcgagtatc
Secondary structure (Cloverleaf model)
>WENV180085234	Ala	TGC
                   t      ACCA agcgagtatc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     T C G C C     A
      T G A        G      | | | | |     A
    T       T A T G       A G C G G     C
    G       |   | |                 T T
    G       A C A C
      G A          G     AGTC
                    T + G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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