The detailed information of tRNA gene sequence


Sequence ID>WENV180085243
Genome IDMPMD02300121
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 11489
End posion on genome 11579
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attagatctT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCAGTCTTGAAAACTGGCGTAGTTGAAAGGCTA
CCGGGGGTTCGAATCCCCCCCTCTCCGACC
Downstream region at tRNA end position 
ttaaaatatt
Secondary structure (Cloverleaf model)
>WENV180085243	Ser	TGA
                   T      GACC ttaaaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTAGTTGAAAGGCTACC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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