The detailed information of tRNA gene sequence


Sequence ID>WENV180085272
Genome IDMPMD02304129
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1117
End posion on genome 1206
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatagaaact
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTGATACCAGCTGGTTGCTAACTAGCCGTAGTTTAACGACTA
CCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaactaatt
Secondary structure (Cloverleaf model)
>WENV180085272	Ser	GCT
                   t      GCCA aaaactaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G       + | | |                 T T
    T       T A C C
      T G A        A     CGTAGTTTAACGACTACC
                    G - C
                    C - G
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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