The detailed information of tRNA gene sequence


Sequence ID>WENV180085297
Genome IDMPMD02308074
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 322
End posion on genome 395
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
aattacacat
tRNA gene sequence
AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGAGGGTTCAAGT
CCTTCCACTCCTGCag
Downstream region at tRNA end position
aaatagtaaa
Secondary structure (Cloverleaf model)
>WENV180085297	Trp	CCA
                   t      GCag aaatagtaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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