The detailed information of tRNA gene sequence


Sequence ID>WENV180085300
Genome IDMPMD02308222
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1654
End posion on genome 1578
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
taccattcct
tRNA gene sequence 
TGGTCCGTAGCTCAGTTGGTTAGAGCATCGCACTGATAATGCGGGGGTCGGTGGTTCGAG
TCCACCCGGACCAACCA
Downstream region at tRNA end position 
ttctttttag
Secondary structure (Cloverleaf model)
>WENV180085300	Ile	GAT
                   t      ACCA ttctttttag
                     T - A
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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