The detailed information of tRNA gene sequence


Sequence ID>WENV180085304
Genome IDMPMD02308933
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 4004
End posion on genome 4093
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccgcttggt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAGGCGCACGCCTGGAAAGCGTGATTACTTGAAAGGGTA
ACGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttttcttcg
Secondary structure (Cloverleaf model)
>WENV180085304	Ser	GGA
                   t      GCCA tttttcttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     ATTACTTGAAAGGGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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