The detailed information of tRNA gene sequence


Sequence ID>WENV180085318
Genome IDMPMD02311430
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1239
End posion on genome 1167
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tctgcgcggg
tRNA gene sequence 
GGGCGTTTAGCACAGTGGTAGAGCGTCCGTTTTGCATACGGAAGGTCGAGGGTTCGAACC
CCTCATCGTCCCCtt
Downstream region at tRNA end position 
tttgcagttc
Secondary structure (Cloverleaf model)
>WENV180085318	Ala	TGC
                   g      CCtt tttgcagttc
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T   T
                     T - A          C A
                    T     C T C C C     A
        G A        A      | | | | |     G
      T     C A C G       G A G G G     C
      G     |   | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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