The detailed information of tRNA gene sequence


Sequence ID>WENV180085324
Genome IDMPMD02312601
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 28
End posion on genome 100
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctccccttt
tRNA gene sequence 
GGGGAGGTAGCCAAGTGGTAAGGCAATGGATTGCAAATCCATGTATCGCCGGTTCGACTC
CGGTCCTCCCCTCtc
Downstream region at tRNA end position 
acgcagcgtc
Secondary structure (Cloverleaf model)
>WENV180085324	Cys	GCA
                   t      TCtc acgcagcgtc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     T G G C C     A
        G A        A      + | | | |     G
      T     A C C G       G C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GTATC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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