The detailed information of tRNA gene sequence


Sequence ID>WENV180085327
Genome IDMPMD02312730
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 389
End posion on genome 465
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tggccacagc
tRNA gene sequence 
CGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACTCCCGCAACCA
Downstream region at tRNA end position 
gatttaaaga
Secondary structure (Cloverleaf model)
>WENV180085327	fMet	CAT
                   c      ACCA gatttaaaga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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