The detailed information of tRNA gene sequence


Sequence ID>WENV180085359
Genome IDMPMD02316434
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1000
End posion on genome 1095
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaatcttggt
tRNA gene sequence 
GGGAGTGGTTCGGGGCTGGGACCCGCACGGCCTTCAAAGCCGTTGGGGGCCGTTTAGGAC
GGGCCCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
cactgactat
Secondary structure (Cloverleaf model)
>WENV180085359	SeC	TCA
                   t      GCCA cactgactat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    T     T A C C C     A
        C G        T      + | | | |     G
      T     G G G C       G T G G G     C
      G     | | | |                 T T
      G     C C C G
        G A        C     TGGGGGCCGTTTAGGACGGGCCCG
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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