The detailed information of tRNA gene sequence


Sequence ID>WENV180085439
Genome IDMPMD02325961
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 325
End posion on genome 253
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
gtagccaacc
tRNA gene sequence 
GCACCCATGGTCTAGTGGCTATGACGTCAGCCTAACACGCTGAAGGTCGCCAGTTCGATC
CTGGCTGGGTGTAttt
Downstream region at tRNA end position 
ttcacctcgg
Secondary structure (Cloverleaf model)
>WENV180085439	Val	AAC
                   c      Attt ttcacctcgg
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          C T
                    T     C G G T C     A
      T G A        G      | | | | |     G
    G       T C T G       G C C A G     C
    G         | | |                 T T
    C       T G A C
      T A          G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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