The detailed information of tRNA gene sequence


Sequence ID>WENV180085457
Genome IDMPMD02328322
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 870
End posion on genome 794
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cccagattgt
tRNA gene sequence 
TGCGGGGTAGAGCAGCCAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGGGGGTTCGAA
TCCCTCCCCCGCTACCA
Downstream region at tRNA end position 
cacagaaacg
Secondary structure (Cloverleaf model)
>WENV180085457	fMet	CAT
                   t      ACCA cacagaaacg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    C       C G A G       G G G G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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