The detailed information of tRNA gene sequence


Sequence ID>WENV180085458
Genome IDMPMD02328806
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 448
End posion on genome 365
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttattcgtT
tRNA gene sequence 
GCCGAAGTTGGGTAGTGGTAGCCCGCTTGCTTGGAAAGCAAGTTTCTTTCGAGATATGTA
GGTTCGATTCCTACCTTCGGCGTag
Downstream region at tRNA end position 
ttgaaggaat
Secondary structure (Cloverleaf model)
>WENV180085458	Ser	GGA
                   T      GTag ttgaaggaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C A T C C     A
        G A        T      | | | | |     G
      T     T G G G       G T A G G     C
      G     + | | |                 T T
      G     G C C C
        T A        G     TTTCTTTCGAGATAT
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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