The detailed information of tRNA gene sequence


Sequence ID>WENV180085460
Genome IDMPMD02329226
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 723
End posion on genome 799
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gccctggaat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
actctcagag
Secondary structure (Cloverleaf model)
>WENV180085460	fMet	CAT
                   t      ACCA actctcagag
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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